Japan Bioinformatics
BioinformaticsExpression Analysis
Many of the data generated by processing short reads, including transcript quantification, miRNA and ChIP analysis can be analyzed using Simbiot’s expression analysis algorithms. In most cases, these data need to be pre-processed using variance stabilization algorithms. For this purpose, Simbiot integrates the DESeq package from Bioconductor .
High Speed Sequencer: Prior to Variance Reduction
High Speed Sequencer: After Variance Reduction
High Speed Sequencer: After Normalization
Classify Samples, set Parameters and Perform Expression Analysis of High Speed Sequencer Data
Classify Samples, set Parameters and Perform Expression Analysis of High Speed Sequencer Data
Results Include Gene Expression as well as known ncRNA
Results Include Gene Expression as well as known ncRNA